Workshop | Core Facilities Workshop

Nygen.io Workshop on Single Cell Analysis

Parashar Dhapola, PhD (Co-founder and CEO, Nygen)

Overview

Take part in this free 3 hour hands-on course from matrix files to biology you can act on. Over one focused morning, work the full single-call analysis workflow in the browser, including novel LLM-based methods for cell-type annotation.

Wednesday, 30 September, 09:00-12:00

What you’ll do in the workshop: 

  • Take data from matrix files to UMAPs, clustering, and QC, all in the browser
  • Annotate cell types and states with evidence you can inspect
  • Run differential expression on cell selections you define
  • Integrate multiple datasets and correct for batch effects
  • Move from labels to biology you can act on

Nygen.io is a Swedish startup specializing in cloud-based analysis solutions for biological researchers. 

Venue:
IMB 2nd floor Seminar Room
Ackermannweg 4
&
streamed via Zoom.

Parashar Dhapola, PhD (Co-founder and CEO, Nygen)


Nygen.io Single Cell Analysis Course
Date: 30 Sep 2026
Time: 09:00 - 12:00
Location: IMB
Contact: events(at)imb.de