Publications co-authored by Genomics Core Facility

Volckmar AL*, Han CT*, Pütter C, Haas S, Vogel CI, Knoll N, Struve C, Göbel M, Haas K, Herrfurth N, Jarick I, Grallert H, Schürmann A, Al-Hasani H, Hebebrand J, Sauer S and Hinney A (2016). Analysis of genes involved in body weight regulation by targeted re-sequencing. PLoS One, 11, e0147904

Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA and Ketting RF (2015). Piwi Proteins and piRNAs in mammalian oocytes and early embryos. Cell Rep, 10, 2069-82

Rosenkranz D, Han CT, Roovers EF, Zischler H and Ketting RF (2015). Piwi proteins and piRNAs in mam-malian oocytes and early embryos: From sample to sequence. Genomics Data, 5, 309-313

Publications acknowledging Genomics Core Facility

Pataskar A, Jung J, Smialowski P, Noack F, Calegari F, Straub T and Tiwari VK (2016). NeuroD1 reprograms chromatin and transcription factor landscapes to induce the neuronal program. EMBO J, 35, 24-45

Schick S, Becker K, Thakurala S, Fournier D, Hampel MH, Legewie S* and Tiwari VK* (2016). Identifying novel circadian transcriptional regulators. Mol Cell Biol, 36, 545-58

de Albuquerque BF, Placentino M and Ketting RF (2015). Maternal piRNAs are essential for germline development following de-novo establishment of endo-siRNAs in Caenorhabditis elegans. Dev Cell, 34, 448-56

Sahu SK, Garding A, Tiwari N, Thakurela S, Toedling J, Gebhard S, Ortega F, Schmarowski N, Berninger B, Nitsch R, Schmidt M and Tiwari VK (2015). JNK-dependent gene regulatory circuitry governs mesenchymal fate. EMBO J, 34, 2162-2181

Schick S, Fournier D, Thakurela S, Sahu SK, Garding A and Tiwari VK (2015). Dynamics of chromatin accessibility and epigenetic state in response to UV damage. J Cell Sci, 128, 4380-4394

Thakurela S, Sahu SK, Garding A and Tiwari VT (2015). Dynamics and function of distal regulatory elements during neurogenesis and neuroplasticity. Genome Res, 25, 1309-1324

de Albuquerque BF, Luteijn MJ, Cordeiro Rodrigues RJ, van Bergeijk P, Waaijers S, Kaaij LJ, Klein H, Boxem M and Ketting RF (2014). PID-1 is a novel factor that operates during 21U-RNA biogenesis in Caenorhabditis elegans. Genes Dev, 28, 683-8

Malone CD, Mestdagh C, Akhtar J, Kreim N, Deinhard P, Sachidanandam R, Treisman J and Roignant JY (2014). The exon junction complex controls transposable element activity by ensuring faithful splicing of the piwi transcript. Genes Dev, 28, 1786-99

Schäfer A, Karaulanov E, Stapf U, Döderlein G and Niehrs C (2013). Ing1 functions in DNA demethylation by directing Gadd45a to H3K4me3. Genes Dev, 27, 261-73

Gierl MS, Gruhn WH, von Seggern A, Maltry N, and Niehrs C (2012). GADD45G functions in male sex de-termination by promoting p38 signaling and Sry expression. Dev Cell, 23, 1032-42